Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015925105.1_cds_XP_016473374.1_65510
CDS Infomation

[gene=LOC107795279] [db_xref=GeneID:107795279] [protein=mitogen-activated protein kinase kinase kinase 1-like] [protein_id=XP_016473374.1] [location=complement(join(30168..30383,31834..31944,33032..33091,33228..33300,34070..34227,34669..34731,35498..35582,36647..37575))] [gbkey=CDS]
Sequence

ATGCATCGATTGCCAGGAATTTTTGCTCATAAGAAACGCGTCGATTCTAAGCAAAAGCGT
GCCGTTTCCTCTTCCGTTAAAGCAAAGCCGAAACTCGAGCGCCTCAACGCTCGCAAAGAT
ATTGATTACGAGCCGTGTATGCTTGAGTTCAACGGCGATAATAAGAGCTTTCGAATCGAA
GGGCATGATAGTGAATTGCTTGATAATTTTTTCGAAAAGTTAGGGTTTTCTGGTCCTGAT
GATTTTGCTATCCCTGCCGCTGAATGGGATGCTATGCAGTTGCGTTCCTCTGCCTCATCG
GAGGTAATTGGTCTAGGTAATAACAAAATTAAGGATAATATTTTTGAATATTCTGATATT
CCTATTAAAGCTAGAGATGTAGTTCAGCTACAAATTAGTGATGCGTCTAAAGCTGATACA
ATTAGATTAGAAGACTGTGTTACAGGGAACGGCATTGTTTTAAATGGAAATGAACCTGTA
ACTTTAGTTCGATGTGGTGGTGGTGGTGGAGGGATTAAGGGTGTAAGGCCACCACTTTTG
GCTCCTCCGCCGGTCATGTCACTGCCAATTGTTGATGATGCGTCATGCTCTACTTGGGAT
ATTTTTAGGGCATTTGGCCCGGAGGATCATAGGGAATCAGGGCTTTGTAGATCTGACGTT
GTCAATGGTGATGCAGAACGTGTTAAGAACGAGGTGTATGATGAGGAGGAGAATAGTACT
AGTAGGAGAAGAGTAGGAGTGAGTAACTTACTATCGGAGTCCTGTTCTTTTACCACTACT
TCGAATGACGATGATTCTTCTAGCTCCACGACTGAGCGTATGTCAAGCATCTCACCGAAT
GGGAGATTCGCACGCTACATTACATACTGGGACAAAGGTGATCTCCTAGGACGTGGATCT
TTTGGATCCGTATATGAAGGAATTTCAGATGATGGTTTCTTTTTTGCTGTGAAGGAAGTT
TCATTACTTGATCAAGGCGATGGGGGAAGGCAAAGTCTATACCAACTTGAACAGGAGATT
GAGCTTCTAAGTCAGTTCGAACATGAGAACATAGTTCGATATTATGGAACTGACAAGGAT
GATTCAAAATTGTACATCTTTCTTGAGCTGGTTACACAAGGATCTCTGTTGAGCCTTTAC
CAGAAATATCACCTTCGAGATTCGCAAGTATCCGTCTACACAAGGCAGATTTTACATGGT
TTGAAGTATTTGCATGACCGAAATGTGGTTCACAGAGATATTAAATGTGCTAATATATTG
GTGGATGCTAACGGATCGGTCAAGCTTGCTGATTTTGGCCTTGCAAAGGCTACTAAGTTA
AATGATGTCAAGTCTTGCAAGGGTACTGCTCTTTGGATGGCTCCTGAAGTTGTGAACAGG
AAGAACCAAGGCTATGGACAAGCGGCTGATATATGGAGCCTTGGCTGCACTGTCTTAGAG
ATGCTTACTCGCCAGTTTCCTTACTCCCACTTAGAAAACCAAATGCAGGCTCTGTTTAAG
ATTGGAAAGGGGGAACCTCCACCTGTCCCTAATACCCTCTCAATAGATGCACGAAATTTT
ATTAACCAGTGTCTTCAAGTGGATCCAAGTGCTCGTCCAACTGCTTCTCAGCTCTTGGAG
CATCCTTTTGTGAAACGAACACTTCCCTCTTCCTCAGGCTCAGCTTCTCCTCACACTCTA
GGAAAGAGGCTTTGA

Peptide Sequence

PEP ID

XP_016473374.1
PEP Infomation

PREDICTED: mitogen-activated protein kinase kinase kinase 1-like [Nicotiana tabacum]
Sequence

MHRLPGIFAHKKRVDSKQKRAVSSSVKAKPKLERLNARKDIDYEPCMLEFNGDNKSFRIE
GHDSELLDNFFEKLGFSGPDDFAIPAAEWDAMQLRSSASSEVIGLGNNKIKDNIFEYSDI
PIKARDVVQLQISDASKADTIRLEDCVTGNGIVLNGNEPVTLVRCGGGGGGIKGVRPPLL
APPPVMSLPIVDDASCSTWDIFRAFGPEDHRESGLCRSDVVNGDAERVKNEVYDEEENST
SRRRVGVSNLLSESCSFTTTSNDDDSSSSTTERMSSISPNGRFARYITYWDKGDLLGRGS
FGSVYEGISDDGFFFAVKEVSLLDQGDGGRQSLYQLEQEIELLSQFEHENIVRYYGTDKD
DSKLYIFLELVTQGSLLSLYQKYHLRDSQVSVYTRQILHGLKYLHDRNVVHRDIKCANIL
VDANGSVKLADFGLAKATKLNDVKSCKGTALWMAPEVVNRKNQGYGQAADIWSLGCTVLE
MLTRQFPYSHLENQMQALFKIGKGEPPPVPNTLSIDARNFINQCLQVDPSARPTASQLLE
HPFVKRTLPSSSGSASPHTLGKRL

Transcript Sequence

Gene sequence data has not been registered.